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Contents:

The baseline (bl) accessor
The clustering stability (cs) accessor
The region similarity (rs) accessor
The supervised (sp) accessor
The point statistics (ps) accessor
The volume (vl) accessor
The plotting (pl) accessor
The SegTraQ (SegTraQ) class
Utility functions

Tutorials:

Data Preparation
Module: Baseline Metrics
Module: Clustering Stability
Module: Region Similarity
Module: Volume (3D)
Module: Supervised Metrics
Module: Point Statistics
Module: Plotting
Technology Focus: 10x Genomics Xenium (Simplified)
Technology Focus: 10x Genomics Xenium

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By Daria Lazic, Matthias Meyer-Bender, Martin Emons

© Copyright 2025, Daria Lazic, Matthias Meyer-Bender, Martin Emons.